Design and evaluation of an accurate CNR-guided small region iterative restoration-based tumor segmentation scheme for PET using both simulated and real heterogeneous tumors


KOÇ A., Güveniş A.

Medical and Biological Engineering and Computing, cilt.58, sa.2, ss.335-355, 2020 (SCI-Expanded, Scopus) identifier identifier

  • Yayın Türü: Makale / Tam Makale
  • Cilt numarası: 58 Sayı: 2
  • Basım Tarihi: 2020
  • Doi Numarası: 10.1007/s11517-019-02094-8
  • Dergi Adı: Medical and Biological Engineering and Computing
  • Derginin Tarandığı İndeksler: Science Citation Index Expanded (SCI-EXPANDED), Scopus, Academic Search Premier, ABI/INFORM, Agricultural & Environmental Science Database, Applied Science & Technology Source, BIOSIS, Biotechnology Research Abstracts, Business Source Elite, Business Source Premier, CINAHL, Compendex, Computer & Applied Sciences, EMBASE, INSPEC, MEDLINE
  • Sayfa Sayıları: ss.335-355
  • Anahtar Kelimeler: Deconvolution, Image restoration, Medical image segmentation, PET, Radiotherapy planning
  • Samsun Üniversitesi Adresli: Evet

Özet

Tumor delineation accuracy directly affects the effectiveness of radiotherapy. This study presents a methodology that minimizes potential errors during the automated segmentation of tumors in PET images. Iterative blind deconvolution was implemented in a region of interest encompassing the tumor with the number of iterations determined from contrast-to-noise ratios. The active contour and random forest classification-based segmentation method was evaluated using three distinct image databases that included both synthetic and real heterogeneous tumors. Ground truths about tumor volumes were known precisely. The volumes of the tumors were in the range of 0.49–26.34 cm3, 0.64–1.52 cm3, and 40.38–203.84 cm3 respectively. Widely available software tools, namely, MATLAB, MIPAV, and ITK-SNAP were utilized. When using the active contour method, image restoration reduced mean errors in volumes estimation from 95.85 to 3.37%, from 815.63 to 17.45%, and from 32.61 to 6.80% for the three datasets. The accuracy gains were higher using datasets that include smaller tumors for which PVE is known to be more predominant. Computation time was reduced by a factor of about 10 in the smaller deconvolution region. Contrast-to-noise ratios were improved for all tumors in all data. The presented methodology has the potential to improve delineation accuracy in particular for smaller tumors at practically feasible computational times.