Doç. Dr. MUSA AYDIN

Yayın Ağı

Makaleler 20

1. Neural architecture search for 3D biomedical image classification

Kuş Z., Kiraz B., AYDIN M., Kiraz A.

Multimedia Systems , cilt.32, sa.4, 2026 (SCI-Expanded, Scopus)

2. A Large-Scale Peripheral Blood Cell Dataset for Automated Hematological Analysis

Yarıkan A. E., Örer C., Akyıldız V., Kuş Z., Aydin M., Paloğlu K. E., et al.

SCIENTIFIC DATA , cilt.13, sa.1, 2026 (SCI-Expanded, Scopus)

3. Improving histopathological image classification with patch-based embeddings and ensemble learning: a study on enteroscope biopsy images

Aydın M.

INTERNATIONAL JOURNAL OF MACHINE LEARNING AND CYBERNETICS , sa.17, ss.1-25, 2026 (SCI-Expanded, Scopus)

4. Multi-teacher based knowledge distillation for retinal vessel segmentation

Eid A., Aydın M., Kuş Z.

Health Information Science and Systems , cilt.13, sa.1, 2025 (SCI-Expanded, Scopus)

5. Investigating hepatic fibrosis heterogeneity by three-dimensional imaging in metabolic dysfunction-associated steatotic liver disease

Yigit B., Ozgonul E., Yaman O., Sipahioglu T., Ulukan B., Cetin Tas Y., et al.

Scientific Reports , cilt.15, sa.1, 2025 (SCI-Expanded, Scopus)

6. MOLiNAS: multi-objective lightweight neural architecture search for whole-slide multi-class blood cell segmentation.

Kuş Z., Kiraz B., Aydin M., Kiraz A.

Health information science and systems , cilt.13, sa.1, ss.78, 2025 (SCI-Expanded, Scopus)

7. Neural Architecture Search for biomedical image classification: A comparative study across data modalities

Kuş Z., Aydin M., Kiraz B., Kiraz A.

Artificial Intelligence in Medicine , cilt.160, 2025 (SCI-Expanded, Scopus)

8. Optimizing Pre-Trained Code Embeddings with Triplet Loss for Code Smell Detection

Nizam A., Islamoglu E., Kerem Adali O., Aydın M.

IEEE Access , cilt.13, ss.31335-31350, 2025 (SCI-Expanded, Scopus) Sürdürülebilir Kalkınma

9. Virtual birefringence imaging and histological staining of amyloid deposits in label-free tissue using autofluorescence microscopy and deep learning

Yang X., Bai B., Zhang Y., AYDIN M., Li Y., Selcuk S. Y., et al.

Nature Communications , cilt.15, sa.1, 2024 (SCI-Expanded, Scopus)

10. Çekişmeli Üretici Ağlar Kullanılarak Medikal Görüntülerin Sanal Hematoksilen ve Eozin (H&E) Boyanması

AYDIN M.

International journal of advances in engineering and pure sciences (Online) , cilt.36, 2024 (TRDizin)

11. MedSegBench: A comprehensive benchmark for medical image segmentation in diverse data modalities

Kus Z., Aydın M.

SCIENTIFIC DATA , cilt.11, sa.1, ss.1-115, 2024 (SCI-Expanded, Scopus)

12. Enhancing resolution and contrast in fibre bundle-based fluorescence microscopy using generative adversarial network

Ketabchi A. M., Morova B., Uysalli Y., AYDIN M., Eren F., Bavili N., et al.

Journal of Microscopy , cilt.295, sa.3, ss.236-242, 2024 (SCI-Expanded, Scopus)

13. Automated HER2 Scoring in Breast Cancer Images Using Deep Learning and Pyramid Sampling

Selcuk S. Y., Yang X., Bai B., Zhang Y., Li Y., AYDIN M., et al.

BME Frontiers , cilt.5, 2024 (Scopus)

14. Differential evolution-based neural architecture search for brain vessel segmentation

Kuş Z., Kiraz B., Göksu T. K., AYDIN M., Özkan E., Vural A., et al.

Engineering Science and Technology, an International Journal , cilt.46, 2023 (SCI-Expanded, Scopus)

15. Low-cost VIS/NIR range hand-held and portable photospectrometer and evaluation of machine learning algorithms for classification performance

Heydarov S., AYDIN M., FAYDACI Ç., Tuna S., ÖZTÜRK S.

Engineering Science and Technology, an International Journal , cilt.37, 2023 (SCI-Expanded, Scopus)

16. DeepCAN: A Modular Deep Learning System for Automated Cell Counting and Viability Analysis

Eren F., Aslan M., Kanarya D., Uysalli Y., AYDIN M., Kiraz B., et al.

IEEE Journal of Biomedical and Health Informatics , cilt.26, sa.11, ss.5575-5583, 2022 (SCI-Expanded, Scopus)

17. An LED-Based structured illumination microscope using a digital micromirror device and GPU accelerated image reconstruction

AYDIN M., Uysalli Y., Özgönül E., Morova B., Tiryaki F., Firat-Karalar E. N., et al.

PLoS ONE , cilt.17, sa.9 September, 2022 (SCI-Expanded, Scopus)

18. Fabrication and characterization of large numerical aperture, high-resolution optical fiber bundles based on high-contrast pairs of soft glasses for fluorescence imaging

Morova B., Bavili N., Yaman O., Yigit B., Zeybel M., AYDIN M., et al.

Optics Express , cilt.27, sa.7, ss.9502-9515, 2019 (SCI-Expanded, Scopus)

19. Mikrodenetleyicileri Kullanarak Türkçe Sesli Komutlarla Beş Eksenli Manipülatör Kontrolü

AK A., TOPUZ V., AYDIN M.

International journal of advances in engineering and pure sciences (Online) , cilt.30, ss.453-459, 2018 (TRDizin)

20. An Object Detection and Identification System for a Mobile Robot Control

AYDIN M., ERDEMİR G.

Balkan Journal of Electrical and Computer Engineering , cilt.5, sa.2, ss.73-76, 2017 (TRDizin)

Hakemli Bilimsel Toplantılarda Yayımlanmış Bildiriler 34

1. Quantization Techniques for Resource-Efficient Medical Image Segmentation Across Diverse Modalities

GÖKSU T., AYDIN M., KUŞ Z.

2025 16th International Conference on Electrical and Electronics Engineering (ELECO), Bursa, Türkiye, 27 - 29 Kasım 2025, (Tam Metin Bildiri)

2. Multi-Objective Surrogate-Assisted Neural Architecture Search for Digital Pathology: A Tree-Based Regression Approach

KAYA AKÇELİK Z., DİK S. Z., KUŞ Z., AYDIN M.

2025 16th International Conference on Electrical and Electronics Engineering (ELECO), Bursa, Türkiye, 27 - 29 Kasım 2025, (Tam Metin Bildiri)

3. A Systematic Comparison of Text and Image Encoders for Visual Question Answering: From RNN to LLM-Based Representations

DİK S. Z., HOŞAVCI R., KAYA AKÇELİK Z., KUŞ Z., AYDIN M.

2025 16th International Conference on Electrical and Electronics Engineering (ELECO), Bursa, Türkiye, 27 - 29 Kasım 2025, (Tam Metin Bildiri)

4. Distilling Knowledge or Transferring Weights? An Experimental Perspective on Classifiers

Öğ M., Yıldızlı B., KUŞ Z., AYDIN M.

2025 16th International Conference on Electrical and Electronics Engineering (ELECO), Bursa, Türkiye, 27 - 29 Kasım 2025, (Tam Metin Bildiri)

5. Shapley Patch Valuation Method for Histopathological Image Classification

Karadeniz B. S., Dik S. Z., Kuş Z., Aydın M.

10th International Conference on Machine Learning Technologies, Helsinki, Finlandiya, 23 - 25 Mayıs 2025, (Tam Metin Bildiri)

6. Data Valuation with Shapley-based Methods for Medical Image Classification

KAYA AKÇELİK Z., HOŞAVCI R., DİK S. Z., AYDIN M., KUŞ Z.

10th International Conference on Machine Learning Technologies, Helsinki, Finlandiya, 23 - 25 Mayıs 2025, (Tam Metin Bildiri)

7. Leukemia White Blood Cell Classification Using DenseNet121 Embeddings and Ensemble Learning

Goksu T., Kus Z., AYDIN M.

9th International Symposium on Innovative Approaches in Smart Technologies, ISAS 2025, Gaziantep, Türkiye, 27 - 28 Haziran 2025, (Tam Metin Bildiri)

8. Design and Image Analysis of an APS-Derived CMOS Neuromorphic Model Mimicking Retinal Rod and Cone Pathways

Munaf A., Islam M. T., Kus Z., Aydın M., Al-Shidaifat A., Kim S. K., et al.

2025 7th International Conference on Electrical Information and Communication Technology, EICT 2025, Khulna, Bangladeş, 18 - 20 Aralık 2025, (Tam Metin Bildiri)

9. Neural Architecture Search for Histopathological Image Classification Histopatoloji G r nt lerinin Siniflandirilmasi i in Sinir Mimarisi Arama

Koc S., Kus Z., Kiraz B., Aydın M.

33rd IEEE Conference on Signal Processing and Communications Applications, SIU 2025, İstanbul, Türkiye, 25 - 28 Haziran 2025, (Tam Metin Bildiri)

10. A Hybrid CNN-Tree Based Model for Enhanced Image Classification Performance İyileştirilmiş Görüntü Sınıflandırma Performansı için Hibrit ESA-Ağaç Temelli Bir Model

AYDIN M., Kuş Z., Akçelik Z. K.

32nd IEEE Conference on Signal Processing and Communications Applications, SIU 2024, Mersin, Türkiye, 15 - 18 Mayıs 2024, (Tam Metin Bildiri)

11. The Effect of Class-Weighted Penalization in Deep Neural Networks for Multi-Class Cell Segmentation Çok Sınıflı Hücre Bölütleme için Derin Sinir Ağlarında Sınıf Ağırlıklı Cezalandırmanın Etkisi

Aydın M., Kuş Z., Kiraz B., Hoşavcı R., Kiraz A.

32nd IEEE Conference on Signal Processing and Communications Applications, SIU 2024, Mersin, Türkiye, 15 - 18 Mayıs 2024, (Tam Metin Bildiri)

12. Deep Learning-Enabled Classification of HER2 Score in Breast Cancer Using Pyramid Sampling

Selcuk S. Y., Yang X., Bai B., Zhang Y., Li Y., AYDIN M., et al.

2024 Conference on Lasers and Electro-Optics, CLEO 2024, North Carolina, Amerika Birleşik Devletleri, 7 - 10 Mayıs 2024, (Tam Metin Bildiri)

13. PBC-NAS: Neural Architecture Search for Peripheral Blood Cells Classification PBC-NAS: Periferik Kan Hücrelerinin Sınıflandırılması için Sinir Mimarisi Arama

Kuş Z., Kiraz B., AYDIN M., Kiraz A.

32nd IEEE Conference on Signal Processing and Communications Applications, SIU 2024, Mersin, Türkiye, 15 - 18 Mayıs 2024, (Tam Metin Bildiri) Sürdürülebilir Kalkınma

14. BioNAS: Neural Architecture Search for Multiple Data Modalities in Biomedical Image Classification

Kuş Z., Kiraz B., AYDIN M., Kiraz A.

International Conference on Advanced Engineering, Technology and Applications, ICAETA 2024, Catania, İtalya, 24 - 25 Mayıs 2024, cilt.1138 LNNS, ss.539-550, (Tam Metin Bildiri)

15. Neural Architecture Search Using Metaheuristics for Automated Cell Segmentation

Kuş Z., AYDIN M., Kiraz B., Can B.

14th Metaheuristics International Conference, MIC 2022, Ortigia-Syracuse, İtalya, 11 - 14 Temmuz 2022, cilt.13838 LNCS, ss.158-171, (Tam Metin Bildiri)

16. A Deep Learning Model for Automated Segmentation of Fluorescence Cell images

AYDIN M., Kiraz B., Eren F., Uysalh Y., Morova B., Can Ozcan S., et al.

A Life in Mathematical Physics: Conference in Honour of Tekin Dereli, DERELI-FS 2021, Virtual, Online, 26 - 28 Kasım 2021, cilt.2191, (Tam Metin Bildiri)

17. Implementing of Transfer Learning Method in the Diagnosis of Skin Diseases with Convolutional Neural Networks Evrisimsel Sinir Aglan ile Cilt Hastaliklarmm Tanismda Transfer Ogrenme Yonteminin Uygulanmasi

Sari A., Nizam A., AYDIN M.

7th International Conference on Computer Science and Engineering, UBMK 2022, Diyarbakır, Türkiye, 14 - 16 Eylül 2022, ss.142-147, (Tam Metin Bildiri) Sürdürülebilir Kalkınma

18. Removal of Gaussian Distributed Noise in Images with Deep Neural Network Models Görüntülerdeki Gauss Daǧilimli Gürültülerin Derin Sinir Aǧi Modelleri ile Giderilmesi

Kus Z., AYDIN M.

30th Signal Processing and Communications Applications Conference, SIU 2022, Safranbolu, Türkiye, 15 - 18 Mayıs 2022, (Tam Metin Bildiri)

19. Medical image segmentation using deep neural networks Derin sinir aǧlari kullanarak medikal görüntü bölütleme

AYDIN M.

29th IEEE Conference on Signal Processing and Communications Applications, SIU 2021, Virtual, Istanbul, Türkiye, 9 - 11 Haziran 2021, (Tam Metin Bildiri)

20. Empirical Comparison of Deep Neural Networks for Brain Vessel Segmentation Beyin Damar Bölütlemesinde Derin Sinir Aglarmm Deneysel Karçilaçtinlmasi

Koçak T., AYDIN M., Kiraz B.

6th International Conference on Computer Science and Engineering, UBMK 2021, Ankara, Türkiye, 15 - 17 Eylül 2021, ss.751-756, (Tam Metin Bildiri)

21. Image Reconstruction in Frequency Space using Sinusoidal Illumination Patterns Sinuzoidal Aydinlatma Desenleri Kullanilarak Frekans Uzayinda Goruntu Yeniden Yapilandirma

AYDIN M., Kiraz A., Uysalli Y., Ozgonul E., Morova B.

28th Signal Processing and Communications Applications Conference, SIU 2020, Gaziantep, Türkiye, 5 - 07 Ekim 2020, (Tam Metin Bildiri)

22. An LED-based super resolution GPU implemented structured illumination microscope

AYDIN M., Uysalll Y., Özgönül E., Morova B., Kiraz A.

Single Molecule Spectroscopy and Superresolution Imaging XIII 2020, California, Amerika Birleşik Devletleri, 1 - 02 Şubat 2020, cilt.11246, (Tam Metin Bildiri)

23. Simulation and Comparison of Pathfinding Algorithms using Real Turkey Data Gerçek Türkiye Verileri Kullanilarak Yol Bulma Algoritmalarinin Simülasyonu ve Karşilaştirilmasi

Alkan M., AYDIN M.

2018 International Conference on Artificial Intelligence and Data Processing, IDAP 2018, Malatya, Türkiye, 28 - 30 Eylül 2018, (Tam Metin Bildiri)

24. Yapılandırılmış Aydınlatma Mikroskobisi Tekniği ve Fiber Demeti Kullanılarak Yüksek Çözünürlüklü Mikroendoskop Geliştirilmesi

AYDIN M., MOROVA B., DOĞAN B., KİRAZ A.

23. Biyomedikal Bilim ve Teknoloji Sempozyumu, İstanbul, Türkiye, 15 - 17 Aralık 2018, (Özet Bildiri)

25. Digital holograms obtained using advanced evolution strategies

AYDIN M., Kiraz B., Kiraz A., DOĞAN B.

6th International Conference on Control Engineering and Information Technology, CEIT 2018, İstanbul, Türkiye, 25 - 27 Ekim 2018, (Tam Metin Bildiri)

26. Finding smoothness area on the topographic maps for the unmanned aerial vehicle's landing site estimation

AYDIN M., Kuğu E.

6th International Conference on Digital Information and Communication Technology and Its Applications, DICTAP 2016, Konya, Türkiye, 21 - 23 Temmuz 2016, ss.183-186, (Tam Metin Bildiri)

27. Safe landing site detection using SRTM data for the Unmanned Aerial Vehicles Insansiz Hava Araçlari için Srtm Verisi Kullanilarak Uygun Inis Alaninin Tespit Edilmesi

AYDIN M., Kuğu E.

24th Signal Processing and Communication Application Conference, SIU 2016, Zonguldak, Türkiye, 16 - 19 Mayıs 2016, ss.2125-2128, (Tam Metin Bildiri)

28. UAV Path Planning with Parallel Genetic Algorithms an CUDA Architecture

Cekmez U., AYDIN M., Özsığınan M., Şahizgöz Ö. k.

The 2014 International Conference of Parallel and Distributed Computing, London, U.K., 2014., Londrina, Brezilya, 07 Ocak 2014, (Tam Metin Bildiri)

29. UAV path planning with parallel genetic algorithms on CUDA architecture

Cekmez U., Ozsiginan M., AYDIN M., Sahingoz O. K.

World Congress on Engineering, WCE 2014, London, İngiltere, 2 - 04 Temmuz 2014, cilt.1, ss.551-557, (Tam Metin Bildiri)

30. Assamese character recognition with artificial neural networks Yapay sinir aǧlari ile assamese karakter tanima

AYDIN M., Çelik E.

2013 21st Signal Processing and Communications Applications Conference, SIU 2013, Haspolat, Türkiye, 24 - 26 Nisan 2013, (Tam Metin Bildiri)

31. Early detection of hazardous weather conditions in Turkey with satellite images using support vector machines and artificial neural networks Destek vektör makineleri ve yapay sinir aglari kullanarak türkiye'deki tehlikeli hava durumlarinin uydu görüntüleri ile erken tespiti

AYDIN M., Çelik E.

2013 21st Signal Processing and Communications Applications Conference, SIU 2013, Haspolat, Türkiye, 24 - 26 Nisan 2013, (Tam Metin Bildiri)

32. Parallelization of bitonic sort and radix sort algorithms on many core GPUs

Yildiz Z., AYDIN M., Yilmaz G.

2013 10th International Conference on Electronics, Computer and Computation, ICECCO 2013, Ankara, Türkiye, 7 - 08 Kasım 2013, ss.326-329, (Tam Metin Bildiri)

33. Hands on arm based embedded system experiments using OMAP-L138 experimenter kit

AYDIN M., BENVENİSTE R.

5th European DSP in Education and Research Conference, EDERC 2012, Amsterdam, Hollanda, 13 Eylül 2012 - 14 Eylül 2013, ss.11-14, (Tam Metin Bildiri)

34. Early diagnosis of osteoporosis using artificial neural networks and support vector machines Yapay si̇ni̇r aǧlari ve destek vektör maki̇neleri̇ kullanarak kemi̇k eri̇mesi̇ hastaliġinin erken teşhi̇si̇

Istanbullu M., Aydın M., Benveniste R., Uçan O. N., Jennane R.

2012 20th Signal Processing and Communications Applications Conference, SIU 2012, Fethiye, Mugla, Türkiye, 18 - 20 Nisan 2012, (Tam Metin Bildiri)

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